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Publications
Listed on this page are scientific publications by users of PPS or of the platforms at the respective founding university. Notify PPS of new publications where proteins from PPS have been used.
Publications 2023
1. Ainelo, A., et al. (2023). "The structure of DarB in complex with Rel(NTD) reveals nonribosomal activation of Rel stringent factors." Sci Adv 9(3): eade4077.
2. Bahnan, W., et al. (2023). "A human monoclonal antibody bivalently binding two different epitopes in streptococcal M protein mediates immune function." EMBO Mol Med 15(2): e16208.
3. Banijamali, E., et al. (2023). "RNA:RNA interaction in ternary complexes resolved by chemical probing." RNA 29(3): 317-329.
4. Barcenas-Walls, J. R., et al. (2023). "Nano-CUT&Tag for multimodal chromatin profiling at single-cell resolution." Nat Protoc.
5. Bartosovic, M. and G. Castelo-Branco (2023). "Multimodal chromatin profiling using nanobody-based single-cell CUT&Tag." Nat Biotechnol 41(6): 794-805.
6. Berger, K., et al. (2023). "Interleukin-6 Induces Stem Cell Propagation through Liaison with the Sortilin–Progranulin Axis in Breast Cancer." Cancers 15(24).
7. Besavilla, D. F., et al. (2023). "Pre-existing CD4 T cell help boosts antibody responses but has limited impact on germinal center, antigen-specific B cell frequencies after influenza infection." Frontiers in Immunology 14.
8. Brown, J. I., et al. (2023). "Cycloguanil and Analogues Potently Target DHFR in Cancer Cells to Elicit Anti-Cancer Activity." Metabolites 13(2).
9. Decker, D., et al. (2023). "Exploring Redox Modulation of Plant UDP-Glucose Pyrophosphorylase." Int J Mol Sci 24(10).
10. Doimo, M., et al. (2023). "Enhanced mitochondrial G-quadruplex formation impedes replication fork progression leading to mtDNA loss in human cells." Nucleic Acids Res 51(14): 7392-7408.
11. Eltschkner, S., et al. (2023). "The structure of songbird MHC class I reveals antigen binding that is flexible at the N-terminus and static at the C-terminus." Frontiers in Immunology 14.
12. Falker-Gieske, C., et al. (2023). "Resistance to chicken amyloid arthropathy is associated with a dysfunctional mutation in serum amyloid A." Faseb Journal 37(1).
13. Frick, I. M., et al. (2023). "IdeS, a secreted proteinase of Streptococcus pyogenes, is bound to a nuclease at the bacterial surface where it inactivates opsonizing IgG antibodies." J Biol Chem 299(11): 105345.
14. Gallego, P., et al. (2023). "The intestinal MUC2 mucin C-terminus is stabilized by an extra disulfide bond in comparison to von Willebrand factor and other gel-forming mucins." Nat Commun 14(1): 1969.
15. García-Revilla, J., et al. (2023). "Galectin-3 shapes toxic alpha-synuclein strains in Parkinson’s disease." Acta Neuropathologica 146(1): 51-75.
16. Happonen, L. J. (2023). "Affinity-Purification Combined with Crosslinking Mass Spectrometry for Identification and Structural Modeling of Host-Pathogen Protein-Protein Complexes." Methods Mol Biol 2674: 181-200.
17. He, Y., et al. (2023). "A subset of antibodies targeting citrullinated proteins confers protection from rheumatoid arthritis." Nat Commun 14(1): 691.
18. Huttner, A., et al. (2023). "Antibody responses to recombinant vesicular stomatitis virus-Zaire Ebolavirus vaccination for Ebola virus disease across doses and continents: 5-year durability." Clin Microbiol Infect 29(12): 1587-1594.
19. Jaiman, D., R. Nagampalli and K. Persson (2023). "A comparative analysis of lipoprotein transport proteins: LolA and LolB from Vibrio cholerae and LolA from Porphyromonas gingivalis." Sci Rep 13(1): 6605.
20. Jons, D., et al. (2023). "Seroreactivity against lytic, latent and possible cross-reactive EBV antigens appears on average 10 years before MS induced preclinical neuroaxonal damage." J Neurol Neurosurg Psychiatry.
21. Knecht, W., et al. (2023). "Oligomeric State of β-Coronavirus Non-Structural Protein 10 Stimulators Studied by Small Angle X-ray Scattering." Int J Mol Sci 24(17).
22. Kosek, D. M., et al. (2023). "Efficient 3'-pairing renders microRNA targeting less sensitive to mRNA seed accessibility." Nucleic Acids Res 51(20): 11162-11177.
23. Li, T., et al. (2023). "Pathogenic antibody response to glucose-6-phosphate isomerase targets a modified epitope uniquely exposed on joint cartilage." Ann Rheum Dis 82(6): 799-808.
24. Lidstrom, T., et al. (2023). "Extracellular Galectin 4 Drives Immune Evasion and Promotes T-cell Apoptosis in Pancreatic Cancer." Cancer Immunol Res 11(1): 72-92.
25. Mahanti, M., et al. (2023). "Ligand Sulfur Oxidation State Progressively Alters Galectin-3-Ligand Complex Conformations To Induce Affinity-Influencing Hydrogen Bonds." Journal of Medicinal Chemistry 66(21): 14716-14723.
26. Moller, M., et al. (2023). "An easy-to-use high-throughput selection system for the discovery of recombinant protein binders from alternative scaffold libraries." Protein Eng Des Sel 36.
27. Nair, R. R. and D. I. Andersson (2023). "Interspecies interaction reduces selection for antibiotic resistance in Escherichia coli." Commun Biol 6(1): 331.
28. Palica, K., et al. (2023). "α-Aminophosphonate inhibitors of metallo-β-lactamases NDM-1 and VIM-2." RSC Med Chem 14(11): 2277-2300.
29. Rafiei, V., et al. (2023). "Verticillium longisporum phospholipase VlsPLA(2) is a virulence factor that targets host nuclei and modulates plant immunity." Mol Plant Pathol 24(9): 1078-1092.
30. Raum, H. N., S. Z. Fisher and U. Weininger (2023). "Energetics and dynamics of the proton shuttle of carbonic anhydrase II." Cell Mol Life Sci 80(10): 286.
31. Sullivan, H. M., et al. (2023). Recombinant Protein Production Using the Baculovirus Expression Vector System (BEVS). Advanced Methods in Structural Biology. Â. Sousa and L. Passarinha. New York, NY, Springer US: 55-77.
32. Tamman, H., et al. (2023). "Structure of SpoT reveals evolutionary tuning of catalysis via conformational constraint." Nat Chem Biol 19(3): 334-345.
33. Torretta, A., et al. (2023). "PARP14 is a writer, reader, and eraser of mono-ADP-ribosylation." J Biol Chem 299(9): 105096.
34. Tükenmez, H., et al. (2023). "A Highly Substituted Ring-Fused 2-Pyridone Compound Targeting PrfA and the Efflux Regulator BrtA in Listeria monocytogenes." MBio 14(3).
35. Wallner, O., et al. (2023). "Optimization of N-Piperidinyl-Benzimidazolone Derivatives as Potent and Selective Inhibitors of 8-Oxo-Guanine DNA Glycosylase 1." ChemMedChem 18(1): e202200310.
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